The tool system is developed by PlantPAN 3.0 (Chow et al., 2019)

CpG island Analysis

Identification of CpG islands in an input sequence

Please input a sequence name and a sequence in FASTA format

>sequence
AATGCCTCTATAATTTTGGGAAGACCATTCCTAGCCACTGGAAGAGCTCTGATAGATGTAGAAGTGGGTGAACTAGTGCTTATAGTGCATAATGAGCAACTGGTCTTTCATGTCTTCAAAGATATACAGCCAACAGGTGAAGAAGAGAGGTGCATACAGGCTGAGCTTATTGATCCAAACCTTCAAAAACCCCCCTGATGATGCACAGCAGAATCTGCAGCTCCAACCTCTCTTGGTAACAATCAATAAAATTTCTCCTGACATCAAACCTAAGTTTGGTGTTGGAAATGCATCACCTACCAAGGAGGAGGTCCCTAAAAAGAAGAAAGTACCCAGAGGATGGAGAAACAAAAAGATCCACACTGAAGGTTTCTCCCCAGGTATGAAGGTGGTGTTGATTAGCAATCCAGCATGGGTTTATACAGTAATCAGAATCCTCTCTCTAGAGCATATTGAGCTACGTTATAGAGACACAGAAAAGAAGTTCAAAGTAAGGGGTGACGAGCTGAGCCCCTATGATCCTCCTCCTTAGAGGATCTGACCGTCAAGCTAGTGACGATAAAGAAGCGCTTGTCGGGAGGCAACCCGATAATTTCGTATCCTTAGTTATTTTTATTTTTCGTATTAGTAGTTTTCTTAGTTATTTTATTTAGTTCTTACTAATTTTCTGATCATGCAACTATGTTTATTCCAGAAACCGAACACCTCAAGCTAAAAAAAAAAGCGAAGAGAGCACACACGACGCGCTCGCGTCACCGACGCGAACGCGTCGATCATGTGCACGTGAAAAATAAAAATTTGACAGAGAGTTGTGTGGGAGTGGCGCCAGAATGGAGCCTTTTGCACAAACGATCCCACGCGTTCGCGTCGTTTGTGATTTTTGCCATTCACACGGGCGCGTCACCGACGCGAACGCGTGACCTCCCAATTCAACGTAAAAGAGTGTTTGGGCAGAGAGTTGTGCTGACTTGGGGCAAGAAGTGTGCTAAAAGCACAAATT

CpG islands are identified by using CpGcluster.