The tool system is developed by PlantPAN 3.0 (Chow et al., 2019)

Gene Group Analysis


    Please input a group of transcript IDs and separate with ";"


    Set parameters

How many co-occurrence TFBSs you want to analyze?
● Input the threshold for analysis
Support >= % (the frequency of promoters containing the TF/TFBS)
● Input the threshold for co-occurrence analysis
Support >= % (the frequency of promoters containing the combinatorial TF/TFBS A and B)
Confidence >= % (the frequency of promoters containing TF/TFBS A also containing B)
   Please specify TF binding motifs:


Please select transcription factors from the following species:










Input custom motif sequence (max=10, separate by line feed) with IUPAC code and group with '[]' (EX: [GC]SS[GC]GC);

   Please customize upstream and downstream coordinates of promoter
X: (MAX=2000) Z: (MAX=2000)
or
Y: (MAX=500)
or