The tool system is developed by PlantPAN 3.0 (Chow et al., 2019)

Simple Sequence Repeat (SSR) Analysis

Identification of simple sequence repeats (SSRs) in an input sequence

Please input a sequence name and a sequence in FASTA format

>sequence
GTTGGGGTTTTTTTTTTTTTCTTCTCAGGCTATCAGAGATGCCGAGAAAGCAGGGCGACTACCGCACCCGGATATGGAAATTCGAGGACGGGTTGAGCAACGTGTTGGTTATACAATTGAACAAATTAATCATATGCGTGATGATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTTGATGCTCCGACTGGCCATTGAAACTGTTGCTCATGACTATGATGTCATAGTTATTGACAGCGCGCCTAACCTGGGTATCGGCACGATTAATGTCGTATGTGCTGCTGATGTGCTGATTGTTCCCACGCCTGCTGAGTTGTTTGACTACACCTCCGCACTGCAGTTTTTCGATATGCTTCGTGATCTGCTCAAGAACGTTGATCTTAAAGGGTTCGAGCCTGATGTACGTATTTTGCTTACCAAATACAGCAATAGTAATGGCTCTCAGTCCCCGTGGATGGAGGAGCAAATTCGGGACCACGCACGTTGTGATATGTAGATGATAATCATTATCACTTTACGGGTCCTTTCCGGTGATCCGACAGGTTACGGGGCGGCGACCTCGCGGGTTTTCGCTATTTATGAAAATTTTCCGGTTTAAGGCGTTTCCGTTCTTCTTCGTCATAACTTAATGTTTTTATTTAAAATACCCTCTGAAAAGAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCCTTCTTCTTCTTCTTCTTCTTAATATGACTTGATGTGATGTGTATAATTGAGTATAAGAACTTAAACCGCAACCCGATCTTATAAGCCTCAGTAGTGTTGCCTTGTTAGAAGACACAAAGCCAAAGACTTTGTTGTCATGTGTATGATTGAGTATAACAACTTAAACCGTAACCCGATCTTAAAAGCCTAAATAATGTTT

Please set parameters for MISA

Max distance between two SSRs: