Marker information




Marker Name seq4A6
Additional Name CC000369;pPGPseq4A6;seq4A06;Seq4A06_c1;Seq4A06_c2;Seq4A06_t1;Seq4A06_t2
Marker type SSR
Motif / Pattern (AT)19
Forward primer (5'-3')
CGCTTGCCCCACTACACTAT
Reverse primer (5'-3')AGCAGTGCTTTGCATGTACG
Resource Ferguson et al., 2004
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Shirasawa et al., 2013
Sujay et al., 2012
Sequence NATAATTTAATATTTATGTCGATTAAATAATGACAAAAAATATTAAAAATTACTTGCGCAAGAGTTTTTCTTAATTAATTCCATTGACTATAACAATAATATAGAGAGACCTACTTGATTATTGAATTTTGATGAGCCTTAGCTTAGTACGTGAATGGTGACCTTTTAAAGACATTTTTTTTATATATCTACACTGATGAGATTCCACTCATTTTTGTTTTAATTTTATATGGCAAATAAAGAGAGTGGTGAATCACAATAATACAATGCTTCTCTTCATGATTGTACCATAGTCCACAGCCCCACCTGATAATGATGATCGAGAAGTGCGCTTGCCCCACTACACTATTCTCCATTCTCCATAACCACACACACACACTATATATATATATATATATATATATATATATATATATAAAACTCTCTACACAGTCACGTACATGCAAAGCACTGCTCTTGCTACAGAGTAGAGTACAACATATAATCAACCATCATAGAGCAAAAAATG


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq4A6seq4A6A01 71.44 Gautami et al., 2012b
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq4A6seq4A06B01
53.29
Gautami et al., 2012b
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq4A6Seq4A06_c1A01
88.848
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq4A6Seq4A06_c2B01
46.35
Peanut Base
Shirasawa et al., 2013
A. hypogaea Runner IAC 886 x (A. ipaensis K30076 x A. duranensis V14167)4xA. hypogaea, A. ipaensis, A. duranensisseq4A6Seq4A06_t1TA01
58.445
Peanut Base
Shirasawa et al., 2013
A. hypogaea Runner IAC 886 x (A. ipaensis K30076 x A. duranensis V14167)4xA. hypogaea, A. ipaensis, A. duranensisseq4A6Seq4A06_t2TB01
44.556
Peanut Base
Shirasawa et al., 2013