Marker information




Marker Name seq3E10
Additional Name CC000339;pPGPseq3E10;seq3E10-2;Seq3E10;Seq3E10_c1;Seq3E10_c2
Marker type SSR
Motif / Pattern (TAA)14
Forward primer (5'-3')
TCCCAAAAATAACAAACATGGA
Reverse primer (5'-3')ACGCTTTGAGACTCGTCGTT
Resource Ferguson et al., 2004
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Huang et al., 2016a
Qin et al., 2012
Shirasawa et al., 2013
Sujay et al., 2012
Sequence GTCAAAGTTCCCAAAAATAACAAACATGGAAAATATTTATTACGAAAGAATTATTCTGACCAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAAAGGAGAGGATAGGAATGGAGTCTCCTAAGTTTGACCAATTTAACTCAACACGAAGTGGCGTCTGAGCTCATCGAAACACTGTCGTTTTAAGTATTAAAAACCGCAAAAACAGCAAAATAACGTCGTTTTGCGTATGAAAAGAGGGAAAGAAAGGTCAACGACGAGTCTCAAAGCGTTTCCGTTTATGGTTTACCTTTTGCAACATATTCAGGATCTGCA


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
TAG 24 x ICGV 86031A. hypogaeaseq3E10pPGPseq3E10LG_AhXII 0.0 Peanut Base
Ravi et al., 2011
Gautami et al., 2012a
Consensus mapA. hypogaeaseq3E10pPGPseq3E10LG_AhXII
0.00
Peanut Base
Gautami et al., 2012a
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq3E10seq3E10A10
3.28
Gautami et al., 2012b
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq3E10seq3E10B10
30.35
Gautami et al., 2012b
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq3E10seq3E10-2B10
75.68
Gautami et al., 2012b
Zhonghua 10 x ICG12625A. hypogaeaseq3E10pPGPseq3E10A10
18.974
Huang et al., 2016a
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq3E10Seq3E10_c1A10
96.769
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq3E10Seq3E10_c2B10
91.73
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaeaseq3E10pPGPseq3E10AhXII
7.498
Peanut Base
Sujay 2012
TAG24 x GPBD4A. hypogaeaseq3E10pPGPseq3E10AhXII
9.8
Peanut Base
Sujay 2012