Marker information




Marker Name seq5D1
Additional Name CC000431;pPGPseq5D1;Seq5D01
Marker type SSR
Motif / Pattern (AT/GA)10
Forward primer (5'-3')
TGGCCAAAACAACTGATTGA
Reverse primer (5'-3')TCCCAACTTTTCCGTTCTTG
Resource Ferguson et al., 2004
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Shirasawa et al., 2013
Sujay et al., 2012
Sequence CTGTCTAATATCCAAATAATTTCAATGCACTACCAATGAAGAGCCAGGAAATTGCATATCCAAATGCTTCATAATCTCATTAGTTGCACAATTTTTTTATTTATTTGGCCAAAACAACTGATTGAATGAAAAATTCAAAACCTTGCAACGGTTGAGAAACTCGACAGTGTTGTCTTGGAGTTCATCGTCGATGGATTCTCCCAACAAAGCAATCGAGTGGATGATCCAGTAACAAAGCCATGGCCGACTACACAAAACAAGTTTTCAAACTTAACAAAAAAAAAAAAAATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGACTTGGCATCAAGAACGGAAAAGTTGGGACCGAGATGGCGAAGGCCTTTGGTGAGAAACTCGATGTGCTTATCGCGCTGCA


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq5D1seq5D1A08 88.42 Gautami et al., 2012b
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq5D1Seq5D01A08
65.761
Peanut Base
Shirasawa et al., 2013