Marker information




Marker Name seq4H11
Additional Name CC000423;pPGPseq4H11;seq4H11_A1;seq4H11_A2;Seq4H11;Seq4H11_c1;Seq4H11_c2;Seq4H11_c3
Marker type SSR
Motif / Pattern (GA)26
Forward primer (5'-3')
ATCACCATCAGAACGATCCC
Reverse primer (5'-3')TTTGTAGCCTTCTGGCGAGT
Resource Ferguson et al., 2004
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Qin et al., 2012
Shirasawa et al., 2013
Sujay et al., 2012
Sequence GATAGCAACCACATCACCATCAGAACGATCCCCACATGATGCAAGATCGTAACTTCCGTTATATCCATTCCGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCTTCACTTGAATCCACCACCCTTCGCAACAAAGATAAAAAGTTTGCACAATCCCATTAATCCAAATCCATTCACCAACTACAAGATCCACGAATCTCCGACAATGGGAAAAAACCAAATCTTTTCACCAACTCCACTCGCCAGAAGGCTACAAATATTGAAATATAAAGGCACGTATTGAAACTGTTTGATGAAAGGCTCCAATGAAAGAAGTAAATACTCCAAGATATTCAAGAAAGGAGGGGGAAACGGAATTGGAAATGGATATATAATACATCATTCTTATTATAAAATATGTCAAATATCAAATATCAAAATCATGTGCACAGTGCGAAAGATTAAAAGTTAAAACTTTGAGAGTGTGTGTCCCAATTGAGGGCCCA


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq4H11seq4H11_A2A01 75.04 Gautami et al., 2012b
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq4H11seq4H11B04
45.7
Gautami et al., 2012b
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq4H11seq4H11A10
72.95
Gautami et al., 2012b
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq4H11seq4H11_A1A10
73.47
Gautami et al., 2012b
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq4H11Seq4H11_c1A01
74.571
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq4H11Seq4H11_c2A10
94.637
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq4H11Seq4H11_c3B04
33.622
Peanut Base
Shirasawa et al., 2013
A. hypogaea Runner IAC 886 x (A. ipaensis K30076 x A. duranensis V14167)4xA. hypogaea, A. ipaensis, A. duranensisseq4H11Seq4H11TA10
6.664
Peanut Base
Shirasawa et al., 2013