Marker information




Marker Name seq4D4
Additional Name CC000393;pPGPseq4D4;Seq4D04_c1;Seq4D04_c2
Marker type SSR
Motif / Pattern (GA)13
Forward primer (5'-3')
CGGCTGTTAGGTAATCAGTTCA
Reverse primer (5'-3')TCAACAGGAATAGCTGCACG
Resource Ferguson et al., 2004
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Shirasawa et al., 2013
Sujay et al., 2012
Sequence GTGGAGATCCAGNANATTTGTTAGGGGGCATATAACTAGAAATCGGCTGTTAGGTAATCAGTTCACAAATTACTAGTGTTTTCTACTCTCTCTCTCTCTCTCTCTCTCTCTCGCTAGTTAAAGCTAGTAGTTACTTGATAGAGTTGTTTAACATTTTCATACTATATTCTCGTCTCTTGTTATTACAATGCAGGGTGTGCTTCCAGTCTACGTGCAGCTATTCCTGTTGATTCCATTTCAAGTCCAGTTGGCTGTTGCAGTATTCAACTTAAACTGTTCTTGTTTTCTGTTGTGAAATTGCAACGATGGTGGAAAAGGTTCTTGACACAAAAAAATATGACCAACTCTGCCATTACCATTCAATCTTGCATTCGTGGATGGATAGCCAGGCAAAAGGCCGTTCTTCATAGACACCAAATTGTTGTCATCCAAGTATGGCAGCATCTTAATTGTTACCAACAATGTTTATCATTTTTCAATTAATTTGTTCTGATTTATTCATGTTCTTTACTCTTTTTAAAAAATTACAATTTTTGTAGTCCCACTGGAAAGGTTACCTTGCACGTAGAGAGTCAAAGCAACTACTTGATTTGCGGTTGAGAATGAGAGAGTCTGCCAGAAATGTAGATGATAGCAAGCGTCTCATAAATAGACTATTGGCAGCGCTTTCAGAGCTACCTTAACATGAAAAGTCTTAGTGATGTCCTGCATACTTGGTTCTACATTAAGG


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq4D4seq4D4A01 71.44 Gautami et al., 2012b
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq4D4Seq4D04_c1A01
87.598
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq4D4Seq4D04_c2B01
45.373
Peanut Base
Shirasawa et al., 2013