Marker information




Marker Name seq5D5
Additional Name CC000433;pPGPseq5D5;seq5D05;Seq5D5;pPGPSeq5D5;Seq5D05_c1;Seq5D05_c2;Seq5D05_c3;Seq5D05_c4;Seq5D05_c5;Seq5D05_t1;Seq5D05_t2
Marker type Genome-SSR
Motif / Pattern (GA)32
Forward primer (5'-3')
AAAAGAAAGACCTTCCCCGA
Reverse primer (5'-3')GCAGGTAATCTGCCGTGATT
Resource Ferguson et al., 2004
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Qin et al., 2012
Shirasawa et al., 2012b
Shirasawa et al., 2013
Sujay et al., 2012
Wang et al., 2012
Peanut Base
Sequence GAGNAAAAAAAATGCATACCTTCAACAAAATAGTAGGCAGAAATCAAGTGATCAAGTCGAAATTCAAAAGAAAGACCTTCCCCGAGTCCCTATTTGTAGCTCTCCAGGACATATTACTAGTGATGCCAGCATAGAGCGAAGGGGCTTTTAGAAAAAGTAAAAGGCCAGATTAACTTAGAAACTATAAACCTCTTCTAGCTAATTGAACTCTTAGTCTGTGCCTATGTTCGGCACAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCATGAAAGACAGAGAAATAATCACGGCAGATTACCTGCCCCAGTCACCTAAGACAGGTCCAGCACCTGCA


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq5D5seq5D5A07 98.37 Gautami et al., 2012b
Consensus mapA. hypogaea, A. ipaensis, A. duranensisseq5D5seq5D05B07
25.48
Gautami et al., 2012b
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq5D5Seq5D05_c1A07
49.124
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq5D5Seq5D05_c2B03
26.025
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq5D5Seq5D05_c3B07
50.184
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq5D5Seq5D05_c4B07
55.56
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaseq5D5Seq5D05_c5B07
79.141
Peanut Base
Shirasawa et al., 2013
A. hypogaea Runner IAC 886 x (A. ipaensis K30076 x A. duranensis V14167)4xA. hypogaea, A. ipaensis, A. duranensisseq5D5Seq5D05_t1TA07
17.287
Peanut Base
Shirasawa et al., 2013
A. hypogaea Runner IAC 886 x (A. ipaensis K30076 x A. duranensis V14167)4xA. hypogaea, A. ipaensis, A. duranensisseq5D5Seq5D05_t2TB07
0.000
Peanut Base
Shirasawa et al., 2013
Tifrunner x GT-C20A. hypogaeaseq5D5pPGPseq5D5LG2
71.20
Peanut Base
Wang et al., 2012