Marker information




Marker Name TC5A6
Additional Name Ah1TC5A06;DQ099203;TC5A06;AHGA372606
Marker type Genome-SSR
Motif / Pattern (TC)27
Forward primer (5'-3')
TCGGTTTGGGAGACACTCTT
Reverse primer (5'-3')TTGTAAGCAGACGCCACATC
Resource Moretzsohn et al., 2005
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Huang et al., 2016a
Zhou et al., 2016
Huang et al., 2016b
Shirasawa et al., 2012b
Shirasawa et al., 2013
Sujay et al., 2012
Sequence AATCAAGGGAGTTTGGCTAACATTCTATTTAAACTAGTTTTTGACAAGCTGGGCCTAGAGAAAAATGATATAAAAGCATATTGGACACCTCTTCGGTTTGGGAGACACTCTTATTCGACCTCTAGGATTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACCACCTTTGGTAAGGATACAAAAGCAAGAACCCTAAGCATAGACTATATTGTGGTGGATGTGGCGTCTGCTTACAATGCCTTGATAGGTCAGACAATATTAAATTGACTTGCGGTAGTAGTCTCAACTTCCCATTGCTGCATGAAGTTCTCTACTTCTGAGGGAATAGCCACTGTAAGGAAAGATCAGAAATTGGTAAGAAGGTGTTATAACAAAAGCCTGAACCTACAAAGGTGTGCGAAAGGGAAAAAAGTCAACACCATAGAGCTCGGAGGTGTCCGAGTTTGGGAGGAATTGAGACCCCAACCTGAAGTAAAAAATTGAAGAGATC


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
TAG 24 x ICGV 86031A. hypogaeaTC5A6TC5A06LG_AhIX 11.5 Peanut Base
Ravi et al., 2011
Gautami et al., 2012a
Consensus mapA. hypogaeaTC5A6TC5A06LG_AhIX
11.50
Peanut Base
Gautami et al., 2012a
Consensus mapA. hypogaea, A. ipaensis, A. duranensisTC5A6TC5A06B09
34.08
Gautami et al., 2012b
Zhonghua 10 x ICG12625A. hypogaeaTC5A6TC5A6B09
60.02
Huang et al., 2016a
Zhonghua 10 x ICG12625A. hypogaeaTC5A6AHGA372606B09
61.1
Huang et al., 2016a
Zhonghua 10 x ICG12625A. hypogaeaTC5A6TC5A6B9
27.557
Huang et al., 2016b
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaTC5A6TC5A06B09
70.133
Peanut Base
Shirasawa et al., 2013
A. hypogaea Runner IAC 886 x (A. ipaensis K30076 x A. duranensis V14167)4xA. hypogaea, A. ipaensis, A. duranensisTC5A6TC5A06TB09
18.699
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaeaTC5A6TC5A06AhIX
21.424
Peanut Base
Sujay 2012
TAG24 x GPBD4A. hypogaeaTC5A6TC5A06AhIX
45.9
Peanut Base
Sujay 2012
TG26 x GPBD4A. hypogaeaTC5A6TC5A06AhIX
22.1
Peanut Base
Sujay 2012