Marker information




Marker Name gi560
Additional Name gi-30419560;gi-0560;gi-560
Marker type Genome-SSR
Motif / Pattern (ACA)5(TCA)4
Forward primer (5'-3')
GGTGGAGGATTTTGGTGAATA
Reverse primer (5'-3')GCAAGAAAGCATAGTAGTTAGCAGTC
Resource Moretzsohn et al., 2005
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Shirasawa et al., 2012b
Shirasawa et al., 2013
Sujay et al., 2012
Sequence CTCTGTTCTTGAATCAGATGAATTATTAGTAGATTATGATTCCTCACAAGAAGACCTCTCTCCTCTCATCACAACTCTCCAACACGAAATCACTGCTTCTCCCTCTCAACATAATAACTGTAACAGATAACAATAATAATGATAATAATATTACTACTACAACTACTCTAGAAGAAGATGAAAGAGTTGAGAGTGTGATGAGACACCTTCTGGAAGCTTCTGATGACGAGCTTGGGATTCCAAACAGCGGTGGTGGACCTGAATTACAGGAAGCTGCAGGGTCGTCATCTTCGGTGGAGGATTTTGGTGAATATAATAATGGAGACGACGACAACAACAACAACATGTTTTCATCATCATCAATATTATGCGGTGATGATGATGGGTTATTATTATGGGAGCATCAAGATGAGACTGCTAACTACTATGCTTTCTTGCATTCTGATCAACTCTTTCTGTAATATAAGTTCTTATTATTAATATTATTGATATTGATGAGGATATTAACTTATTATTATTGATGCATCAAATTTGTGAAAACACA


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
Consensus mapA. hypogaea, A. ipaensis, A. duranensisgi560gi-0560A03 240.23 Gautami et al., 2012b
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnagi560gi560A03
111.887
Peanut Base
Shirasawa et al., 2013
A. hypogaea Runner IAC 886 x (A. ipaensis K30076 x A. duranensis V14167)4xA. hypogaea, A. ipaensis, A. duranensisgi560gi560TA03
71.713
Peanut Base
Shirasawa et al., 2013