Marker information




Marker Name RM17H09
Additional Name BZ999989;pPGSseq18A5;seq18A5;Seq18A05
Marker type SSR
Motif / Pattern (AT/TAA)17
Forward primer (5'-3')
TGATTCGATTTACTCATGCACA
Reverse primer (5'-3')GAGGATTCTTGAGCCTCGAC
Resource Ferguson et al., 2004
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Shirasawa et al., 2013
Sujay et al., 2012
Sequence ATTGGATAATCAATCCTTAGTCATATTTGGCCACCATTCTTTTGGCCACCCGAGACTCACCCTAATATAAAATGTTTTATATTGTCAATATATTAAAATTAAACACTATATTTAAATACTATACTAATTTATAATAGAAAAAGTATAGGTAAACAATGAGAATACTAAACAATGTAAACAATAGATATATCGAATGTTCAATTCAATAGGTATGCAAATGATTATGTTCATTGTTTTTAATTAGACGATTATTTCTTTTGATTCGATTTACTCATGCACAATTAATAATGACTGGATGTTCAATTCATTAGGTATGCAAATAGTTATGTTAATGTTAAGATTTAGGAATTAATTTGGGAGTAGAATATTTTTTTACTTTATTAGGTCAATTTTAAAATTTATTATTCACATTATTTACAAAATTATTGTCTACCTAACAAAACACTTTATCCTATCGTAAGTCCTATATATATATATATATATATATATGCCGCCCATGTGAGTTAGTCGAGGCTCAAGAATCCTCTCTCCTTATTATTA


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
TAG 24 x ICGV 86031A. hypogaeaRM17H09pPGSseq18A5LG_AhIII 90.5 Peanut Base
Ravi et al., 2011
Gautami et al., 2012a
Consensus mapA. hypogaeaRM17H09pPGSseq18A5LG_AhIII
85.99
Peanut Base
Gautami et al., 2012a
Consensus mapA. hypogaea, A. ipaensis, A. duranensisRM17H09seq18A5A03
146.49
Gautami et al., 2012b
Consensus mapA. hypogaea, A. ipaensis, A. duranensisRM17H09seq18A5A03
149.89
Gautami et al., 2012b
Consensus mapA. hypogaea, A. ipaensis, A. duranensisRM17H09RM17H09A04
101.39
Gautami et al., 2012b
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaRM17H09Seq18A05A03
86.632
Peanut Base
Shirasawa et al., 2013