Marker information




Marker Name Seq2D12
Additional Name pPGPseq2D12B;Seq2D12B;pPGPSeq2D12;seq2D12B;CC000268
Marker type Genome-SSR
Motif / Pattern (TAA)12
Forward primer (5'-3')
AAGCTGAACGAACTCAAGGC
Reverse primer (5'-3')TGCAATGGGTACAATGCTAGA
Resource Ferguson et al., 2004
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Huang et al., 2016a
Qin et al., 2012
Shirasawa et al., 2012b
Shirasawa et al., 2013
Sujay et al., 2012
Wang et al., 2012
Peanut Base
Sequence GATATATAGTAAAAAGTAACACTAAAAAGGAACAATAAAAGAAACACTAAAAACTTATTCGGTTTGCTCAAAGACAATAATAATAATAATAACAATAATAATAATAATAATAATAATAATAATAATAATAAGGTGACTGAAAAGAAACAATGGAACGGATATATAATAAAAAATAACACTAAAAACGAACATTAAAAACTTGTCTGATTTGCTCAACTATAGCAACAACAACAACAATAACAATAATAATAATAATAATTATAATAATGATAACAAGAATAATAATAATAATAACAATAACAATAATAATAATGAGGCGACTGAAAAGAAACAATGAGACGGATATATAATAAAAAGTAATACTAAAAAGGAACACTAAAAACTTACCTAAAGGAAAAGAAGAAGCTGAACGAACTCAAGGCAAGGGCAAGCAAGTGACTGAAAAGAAACAATAAGACAGATATATAGTAAAAAGTAACACTAAAAACTTATTCGATTTGATCAAAGACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAACAACATAAGAATTCGGAACCTAGAACACTAAATAAATATAAAATTCAGTAAATCCTAAAAACCAATGCTCATTGACAGTAAGTTATTTCTAGCATTGTACCCATTGCACTATTTCATAAGTATTAAAATTATNTACCAGCATCAGCATCGGAGTNTTCTCGCCTGTCACGCGGGTGACCCCAGGTTCGATCCCCCGGCAACGGGGGCCAAAAATTGACGCGACAGAAAAT


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
ICGS 76 x CSMG 84-1A. hypogaeaSeq2D12pPGPseq2D12BLG19 0.0 Peanut Base
Gautami et al., 2012a
Consensus mapA. hypogaeaSeq2D12pPGPseq2D12BLG_AhXIX
0.00
Peanut Base
Gautami et al., 2012a
Consensus mapA. hypogaea, A. ipaensis, A. duranensisSeq2D12seq2D12BB02
134.63
Gautami et al., 2012b
Zhonghua 10 x ICG12625A. hypogaeaSeq2D12pPGPseq2D12BB02
0
Huang et al., 2016a
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaSeq2D12Seq2D12B02
5.464
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaeaSeq2D12pPGPseq2D12BAhII
29.906
Peanut Base
Sujay 2012
TAG24 x GPBD4A. hypogaeaSeq2D12pPGPseq2D12BAhII
32.0
Peanut Base
Sujay 2012
TG26 x GPBD4A. hypogaeaSeq2D12pPGPseq2D12BAhII
38.5
Peanut Base
Sujay 2012
Tifrunner x GT-C20A. hypogaeaSeq2D12pPGPseq2D12BLG16
34.20
Peanut Base
Wang et al., 2012