Marker information




Marker Name RN12E01
Additional Name AS1RN12E01;DQ099081;RN12E01_A;RN12E01_c1;RN12E01_c2
Marker type SSR
Motif / Pattern (TAT)7(AAC)9
Forward primer (5'-3')
TTCTTTTACAACCCACACACCA
Reverse primer (5'-3')TGGTCATGCTTTCAATCACTTC
Resource Moretzsohn et al., 2005
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Shirasawa et al., 2013
Sujay et al., 2012
Sequence CTTTCTCACTCATCATCACCCACATACTAAATTTTCCAAAATTTTATTCTTTTACAACCCACACACCAATTTTTCCAAAGTTTTTGTTTTTAATTGATACATACAAATTAAAGATTTTATCATATTATTATTATTATTATTATCATGATGAAGAGAGAAAGAGAAGTGATTGAAAGCATGACCATGGCAAATTGCTTGATGCTACTATCTAGAGGAAGTGATCAATTTAAGGCAACATATTCTTCAAGTTTTTCTTCGAATTATAACAACAACAACGACAACAACAACAACCGAGTTTTCGAGTGCAAAACATGTAACAGACAATTCCCTTCATTTCAAGCACTTGGAGGGCATAGAGCTAGTCACAAGAAGCCAAGGTTGATGGATGATGATCATGGTGGCAATAACAAAATGGAAGAACAACATCAATTGGAAGCTCAAAAGCCTAAGACTCATGAATGTTCCATTTGTGGGTTGGAATTTGCAATTGGTCAAGCATTAGGTGGACATATGAGGAGG


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
A. hypogaea Fleur 11 x (A. ipaensis KG30076 x A. duranensis V14167)4xA. hypogaea, A. ipaensis, A. duranensisRN12E01RN12E01_AA04 0.00 Peanut Base
Fonceka et al., 2009
Consensus mapA. hypogaea, A. ipaensis, A. duranensisRN12E01RN12E01A04
147.55
Gautami et al., 2012b
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaRN12E01RN12E01_c1A04
83.393
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaRN12E01RN12E01_c2B04
111.485
Peanut Base
Shirasawa et al., 2013