Marker information




Marker Name RN13D04
Additional Name AS1RN13D04;DQ099084;RN13D04_A;RN13D04_a;RN13D04_b;RN13D04-100;RN13D04_c1;RN13D04_c2
Marker type SSR
Motif / Pattern (CTT)5(TC)9
Forward primer (5'-3')
CCGAGGTAGAATCGCAAGC
Reverse primer (5'-3')GTAATGCCAGGGAGAATCAGC
Resource Moretzsohn et al., 2005
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Mondal et al., 2014
Qin et al., 2012
Shirasawa et al., 2013
Sujay et al., 2012
Wang et al., 2012
Peanut Base
Sequence ACACTCCGAGGTAGAATCGCAAGCTCAACGTTGTTGCCTCTCTCAAACACAAACTAAAATCCTTCTTCTTCTTCTTCTCTCTCTCTCTCTCTCTAAGATGGGGTTATGGCATGTAATGGTGTTGGCGCTAATTATGGCGTTTTGGAACCTAAAGGGTTCAGAAGGGATCCGATTCGTTATAGACAGGGAAGAGTGCTTCTCCCATGATGTCAAATACGAGGGTGACACCGTTCATGTTTCCTTCGTTGTTATTAAGGCTGATTCTCCCTGGCATTACGGTAACGACGGTGTTGATCTCGTGATAAAGGGACCTTCTGGTGAACAAATTCATGATTACCGTGACAAGATCAGTGAAAAGTTTGAGTTTGTGGCTCACAAATCAGGTGTCCACAAATTCTGCTTCAACAACAAGTCTCCTTATCACGAAACCATCGATTTCGATGTACATGTCGGACACTTCTCTTACTTTGAGCAACATGCCAAGGATGAACATTTCAACCCTTTGCTGGAGCAGATACAAAAGTTGGAGGAAGCTCTTTACAACATTCAGTTTGAACAGCATTGGTTGGAGGCACAGACTGACCGCCAAGCAATAGTGAATGATGCAATGAGCAGAAGAGCAGTACACAAAGCAATTTTTGAATCAGCAGCACTAATTGGGGCAAGTGCACTACAAGTCTACCTTCTGCAGCGATTATTTG


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
A. hypogaea Fleur 11 x (A. ipaensis KG30076 x A. duranensis V14167)4xA. hypogaea, A. ipaensis, A. duranensisRN13D04RN13D04_AA07 0.00 Peanut Base
Fonceka et al., 2009
Consensus mapA. hypogaea, A. ipaensis, A. duranensisRN13D04RN13D04A07
91.89
Gautami et al., 2012b
Consensus mapA. hypogaea, A. ipaensis, A. duranensisRN13D04RN13D04B07
0
Gautami et al., 2012b
VG9514 x TAG24A. hypogaeaRN13D04RN13D04_aB07
154.10
Peanut Base
Mondal et al., 2014
VG9514 x TAG24A. hypogaeaRN13D04RN13D04_bB07
156.30
Peanut Base
Mondal et al., 2014
Tifrunner x GT-C20A. hypogaeaRN13D04RN13D04-100LGT17
0.00
Peanut Base
Qin et al., 2012
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaRN13D04RN13D04_c1A07
32.939
Peanut Base
Shirasawa et al., 2013
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaRN13D04RN13D04_c2B07
9.689
Peanut Base
Shirasawa et al., 2013
A. hypogaea Runner IAC 886 x (A. ipaensis K30076 x A. duranensis V14167)4xA. hypogaea, A. ipaensis, A. duranensisRN13D04RN13D04TA07
45.516
Peanut Base
Shirasawa et al., 2013
Tifrunner x GT-C20A. hypogaeaRN13D04AS1RN13D04LG2
95.60
Peanut Base
Wang et al., 2012