Marker information




Marker Name IPAHM254
Additional Name ER974477
Marker type SSR
Motif / Pattern (GA)5AA(GA)20CT(GA)4
Forward primer (5'-3')
TGAAATGGTGGCTTGCAATA
Reverse primer (5'-3')TGCTGAGTCGCTCATTCTCT
Resource Cuc et al., 2008
Fonceka et al., 2009
Gautami et al., 2012a
Gautami et al., 2012b
Shirasawa et al., 2013
Sujay et al., 2012
Sequence ACACCTCATTGTTTCCCTTAAGATTAGCAATAGTCCATGTTAGCTTCCGATCAAAAGATTCATCATCAATAACAGATATTAAATCCCCAATCTCATTACTACGCAGTCTACTGAAATGGTGGCTTGCAATACGGTATCTATGAAAAAAAATTTAATTAATATTATGGTAAAAGAATTTCATGAAAACAGCTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGAGAGAGAAAGAGAGTGAGTGAGTGAGCAATAGAGAGAGAATGAGCGACTCAGCAATAGAAATAGAGAGTGAGGGACTGAGCAATAGAGAGAAAGGCAGANATTTTCAGTACAGAAGGACAAAATTTCAGGAGAATTGAATCGAACTAACTTATTCAGAAAATTCACAGTTTCCTGCATATCAGGGTTGATTGAAACCCGAGATACATTGATCACGTTTTGGAGACTAACTTTATCTACAAATCACAAAACACNATAAGAAG


Linkage map Species Marker Name Name used in map Linkage group Position (cM) Reference
ICGS 76 x CSMG 84-1A. hypogaeaIPAHM254IPAHM254LG02 45.6 Peanut Base
Gautami et al., 2012a
ICGS 44 x ICGS 76A. hypogaeaIPAHM254IPAHM254LG02
3.4
Peanut Base
Gautami et al., 2012a
Consensus mapA. hypogaeaIPAHM254IPAHM254LG_AhII
47.20
Peanut Base
Gautami et al., 2012a
Consensus mapA. hypogaea, A. ipaensis, A. duranensisIPAHM254IPAHM254A02
42.38
Gautami et al., 2012b
Consensus mapA. hypogaea, A. duranensis, A. stenosperma, A. ipaensis, A. magnaIPAHM254IPAHM254A02
35.55
Peanut Base
Shirasawa et al., 2013